YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46947407
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVASLTLTET LAGSHSMRYF ETAVSRPGLG EPRFISVGYV DDTQFVRFDG DAENPRYEPW  60
   61 APWMEQEGPE YWERETQIAK DNVQSFRGSL RNLLLYYNQS EGGSHTFQRL SGCDLGSDGR 120
  121 LLRGYLQFAY EGQDYIALNE DLKTWTAADM AALITRRKWE QAGAAELYKA YLEGECVEWL 180
  181 RRYLERGKET LLRTDPPKAH VTHHPRPEGD VTLRCWALGF YPADITLTWQ LNGEELTQDM 240
  241 ELVETRPAGD GTFQKWASVV VPLGKEQKYT CHVHHEGLPE PLTLRWEPPP STVSNMIIIE 300
  301 VLIVLGAVIN IGAMVAFVLK SKRKIGGKGG VYALAGGSNS IHGSALFLEA FKAILPGPA

Type	Start	End	Confidence
Non-Cytoplasmic	1	295	0.98
Transmembrane Helix	296	319	0.92
Cytoplasmic	320	329	0.88
Transmembrane Helix	330	351	0.64
Non-Cytoplasmic	352	359	0.64