YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7381420
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHSSTGYPD LTGGAAGNGG YHHQTAMNAP VYVPSNRALT QSQYNHVATH FGTAAAQNAW  60
   61 TTDSFGTAHA QLPAQFYTMG SWRAAYDPTG FQRSSPYENA IDFQFGEGRE CVNCGAISTP 120
  121 LWRRDGTGHY LCNACGLYHK MNGMNRPLIK PSKRLTATRR LGLCCTNCGT RTTTLWRRNN 180
  181 EGEPVCNACG LYFKLHGVNR PLAMRKDGIQ TRKRKPKKST SSSDVSKDGK DDDGSVGVGG 240
  241 YGVKSESNAT NYDYVSNCYF SSSFPPLSAS TAAAAAGTGM SMGMGMGVGV GMGMHGMHGS 300
  301 SGELASYHHH QHNVIQTAKL MATS

Type	Start	End	Confidence
Non-Cytoplasmic	1	270	0.84
Transmembrane Helix	271	293	0.87
Cytoplasmic	294	324	0.78