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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7381274
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKFHYKTP AIIALTIAGS AITTHQAYAQ SNSETSEPTN TTSNVNQNQQ PTGNQTAQNQ  60
   61 QATQDTAKTI AGTQQYKDPT QVQPKENDEN LSYDSKLDQL NNQAEPSNEA NAQPTADAQN 120
  121 NTTDQPANVT QQDTEQTNAQ AQNAQQQKLA EQQAQAAQQQ EQANKQQTQE AQQAVQKQVV 180
  181 SEQNKASQPE AQTSVNQTTP QKVEQPKATT YAARSTEPVT TFRSVQQPTQ TATRSAQTTQ 240
  241 TATRSAQPAQ TTYSAPKPSL PKYKPTVNSS INDYIRQQNY KVPTYEQDYS SYIPKYNYRY 300
  301 GKPEGIVIHD TANENSTLNN EVAYMKNNWQ NAFVHGFVDG NRIVETANTD YLRWGAGPVA 360
  361 NERYIHMELV HTHDKDSFAR QMNNIADYAA TNLQYYGLKP DSAEYDGRGT VWTHRAVSNF 420
  421 LGGTDHVDPH GYLQSRGYNY DALYDLINEK YLIKEGVVAP WGTASNTTTQ PTQPTKPTTK 480
  481 PTTKPSTNTS QLKLIPVDSL GRLNNTNNGL YKTVYDKAGV QNSNLNNQTY RLTKKALLGD 540
  541 KSFYLISDYN KGTNYGWVQT GDITYKVGHP VTTNTKTYGV QSGTKLYSTP WGTDKQAVAT 600
  601 VSGTGAQAFK ASKQTEVSPT QFVYGTVNGK SGWVDIAKLS NYTAPKTTVN KPTTQVKGVS 660
  661 TTTPSKTTTT KKAVKPATKP VAKTTTKTAV KPTAKPVAKT TTKTAVKPAT TTTKKVVKPA 720
  721 TKPTTAVKTT KTAVKPAAKK VVNTVKSVAK TTAQKVQPTA KAATTTKAVS KPATTKAATQ 780
  781 TTKAPLNKTI TVNKLGQYVS DNYGLRASVY DKKGAKAAKF LGYTYNITRE RNQDGTLYYL 840
  841 LQNIGLTTPL GWVNAKDVRV ADKGLVTPTS QQYSVNTKSN GLYTTPWGTA KQLIDPLTKQ 900
  901 NGTFKAIKRT LVNKTPYVYG TVNGKTGWVA EKTLTPKTTA KAATTSAQKQ QPAVKYNHDY 960
  961 IVTNNKGYYY KTPNGQVLGS LKDQFGNIIT VFERQVVNGV TWYHGVLANG QTAWVKAADV1020
 1021 RNTLTRTNVS DYSFDQAVAK QMNLPWSPKV QHVPGQWDDA SEDEVRTAMD PRTITEDATQ1080
 1081 KYQFLRLDKA QALSASSVNK LLEGKGILEG QGAAFTQAAK TYDINEIYLI SHALLETGNG1140
 1141 TSALANGGYV NSANKVVTNE PKKYYNMFGI GAIDTDAVRG GFKTAAHYGW DTVEKAIIGG1200
 1201 AKFITSDYLD RGQNTLYRMR WNPSEPATHQ YATDINWASH NATRMKQMYD KIGETGKYFD1260
 1261 TDIYRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle