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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CDR1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLFSSVLL SLCLLSSLFL SNANAKPKLG FTADLIHRDS PKSPFYNPME TSSQRLRNAI  60
   61 HRSVNRVFHF TEKDNTPQPQ IDLTSNSGEY LMNVSIGTPP FPIMAIADTG SDLLWTQCAP 120
  121 CDDCYTQVDP LFDPKTSSTY KDVSCSSSQC TALENQASCS TNDNTCSYSL SYGDNSYTKG 180
  181 NIAVDTLTLG SSDTRPMQLK NIIIGCGHNN AGTFNKKGSG IVGLGGGPVS LIKQLGDSID 240
  241 GKFSYCLVPL TSKKDQTSKI NFGTNAIVSG SGVVSTPLIA KASQETFYYL TLKSISVGSK 300
  301 QIQYSGSDSE SSEGNIIIDS GTTLTLLPTE FYSELEDAVA SSIDAEKKQD PQSGLSLCYS 360
  361 ATGDLKVPVI TMHFDGADVK LDSSNAFVQV SEDLVCFAFR GSPSFSIYGN VAQMNFLVGY 420
  421 DTVSKTVSFK PTDCAKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle