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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9858110
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPFKVLS SIALTAVLGL SFGAGTQSAY AETPVNKTAT SPVDDHLIPE ERLADALKKR  60
   61 GVIDSKASET ETKKAVEKYV ENKKGENSGK EAANGDQLTK DASDFLKKVK DAKADTKEKL 120
  121 NEPATGTPAA TGPVKGGLNG KVPTSPAKQK DYNGEVRKDK VLVLLVEYAD FKHNNIDKEP 180
  181 GYMYSNDFNK EHYEKMLFGN EPFTLDDGSK IETFKQYYEE QSGGSYTVDG TVTKWLTVSG 240
  241 KAADYGADAA TGHDNKGPKG PRDLVKDALK AAVDSGIDLS EFDQFDQYDV NGDGNKNQPD 300
  301 GLIDQLMIIH AGVGQEAGGG KLGDDAIWSH RWTVGPKPFP IEGTQAKVPY WGGKMAAFDY 360
  361 TIEPEDGAVG VFAHEYGHDL GLPDEYDTQY SGQGEPIEAW SIMSGGSWAG KIAGTTPTSF 420
  421 SPQNKEFFQK TIGGNWANIV EVDYEKLNKG IGLATYLDQS VTKSDRPGMI RVNLPDKDVK 480
  481 TIEPAFGKQY YYSTKGDDLH TKMETPLFDL TNATNAKFDF KSLYEIEAGY DFLEVHAVTE 540
  541 DGKQTLIERL GEKATSGNAD STNGKWIDKS YDLSQFKGKK VKLTFDYITD GGLALNGFAL 600
  601 DNASLTVDGK VVFSDDAEGT PQLKLDGFVV SNGTEKKKHN YYVEWRNYAG ADNALKFARG 660
  661 PVFNTGMVVW YADSAYTDNW VGVHPGHGFL GVVDSHPEAI VGTLNGKPTV KSSTRFQIAD 720
  721 AAFSFDKTPA WKVVSPTRGT FTYDGLAGVP KFDDSKTYIN QQIPDAGRIL PKLGLKFEVV 780
  781 GQADDNSAGA VRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle