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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48958327
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVMAPRTLL LVLSGALALT QTRAGSHSMR YFYTYMSGPG RGEPRFIAVG YVDDTQFVRF  60
   61 DSDAASQRME PRAPWVEQEG PEYWDRNTRI MKAETQNAPV GLRNLRGYYN QSEAGSHTLQ 120
  121 IMYGCDLGPD GRLLRGYSQF AYDGRDYIAL NEDLRSWTAA DMAAQNSQRK FQTAGVAEQW 180
  181 RAYLEGECLE CLRRYLENGK ETLQRADPPK THVTHHPVSD HEATLRCWAL GFYPEEITLT 240
  241 WQRDGEEQTQ DTELVETRPA GDGTFQKWAA VVVPSGKEQR YTCHVQHEGL PEPLTLRWEP 300
  301 SSQSTIPIVG IIAGLVLLGT VVTGAVVAAV MWRRKSSDRK GGSYSQAASS DSAQGSDVSL 360
  361 TACKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle