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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11610622
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQPEPQPEPQ PEPQPEPQPE PQPEPQPEPQ PQPQPLAGRQ PLPWPLPLPL PEPQPDPQPD  60
   61 PQPEPQPEPQ PEPQPQPQTP GQVQAGRQPR PKPQPDPHPH PQPEPQPEPR LHPFHRLRLR 120
  121 PHPYPEPHPG PQPEPEPEPE PEPQPEPQPE PQPEPQPEPE PQPEPEPEPE PEPEPEPEPE 180
  181 PEPEPEPEPE PEPEPEPEPE PEPQPEPEPE PEPEPEPEPE PEPEPEPQPE PQPEPEPEPE 240
  241 PQPEPQPEPE PEPEPEPEPE PEPEPEPQPE PQPEPEPQPE PQPDPEPQPE PGPEPGPEPE 300
  301 PEPQLEPQPE PEPEPQPEPE SELDLEPEPE PQPLPEPQPE PEPEPEPEPE PEPEPEPEPE 360
  361 PEPEPEPEPE PEPELELEPQ SQLEPQPSGK KLPARETELT ADHTTERPRG KLTRASQILN 420
  421 TILSNYDHKL RPSIGEKPTV VTVKVFVNSL GPISILDMEY SIDIIFYQTW YDERLRYNDT 480
  481 FETLILHGNV VSQLWIPDTF FRNSKRTQEY DITIPNQMAL IHKDGKVLYT VRMTIDARCS 540
  541 LHMLNFPMDS HSCPLSFSSF SYDEHEMIYK WENFKLKIDA KNTWKLLEFD FTGVNNKTEI 600
  601 ISTPVGDFMV MTFFFNVSRR FGFIVFQNYI PSSVTTMLSW VSFWIKIEAA AARASVALDF 660
  661 YIAICFVLCF CTLLEFTVLN FLTYNNIERQ ASPKFYQFPT NSRANARTRA RARTRARARA 720
  721 RARQQQEVFV CEIVTYEENA EEGYQWSPRS RRPQCPWRRC GRSYVCFRVL RKYFCMVPGC 780
  781 EGNSWQRGRI CIHVYRLDNY SRVLFPITFF FFNVVYWVIC LNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle