YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8886865
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSLMSQCV HIFLAATFVA MSGVHGGNFY RDFDLTWGDG RAKILNNGQM LTLSLDKVSG  60
   61 SGFQSKNQYL FGKIDMQLKL VPGNSAGTVT AYYLSSQGPT HDEIDFEFLG NLSGDPYILH 120
  121 TNIFTQGKGN REQQFYLWFD PTKDFHTYSI LWNPQHIIFS VDGIPIRDFK NLEKYRIPFP 180
  181 KIQPMRLYSS LWDADNWATR GGLVKTDWSK APFTASYRNF QAQACVLSSG RSRCGSGGNR 240
  241 WFNQQLDVAS LKRLRWVQKN YMIYNYCTDV KRFPQGIPTE CKHP

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	284	0.99