YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17065406
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCIATAPL SLSGVPQSHY VKANGLSTTT KLSSICKTSD LTIHKKSNRT RKFSVSAGYR  60
   61 DGSRSGSSGD FIAGFLLGGA VFGAVAYIFA PQIRRSVLNE EDEYGFEKPK QPTYYDEGLE 120
  121 KTRETLNEKI GQLNSAIDNV SSRLRGREKN TSSLNVPVET DPEVEATT

Type	Start	End	Confidence
Cytoplasmic	1	68	0.71
Transmembrane Helix	69	90	0.86
Non-Cytoplasmic	91	168	0.78