YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RSH2L_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVATTIALY ASPPSSVCST PHQISCDLDL TSRSSSTSSS MASSPQKPIV GGLSSLFSSA  60
   61 SVKSSSSSSC SYSTAVDEFS SLRYDRSDDL KDLSFSSSFG YSPAKFVNSF RRDHQSPISV 120
  121 LHGPVSCSCS PPMRMSRDRN LDGSFRLGAS RLFNGFVRKA LGSCVDYELG SDSGLVDELT 180
  181 FPMEVDTIKP YARDLLRRAQ LRHKIFNDES VIKAFYEAEK AHRGQMRASR DPYLQHCVET 240
  241 AMLLANIGAN STVVVAGLLH DTVDDSFMSY DYILRNFGAG VADLVEGVSK LSQLSKLARE 300
  301 NNTACKTVEA DRLHPMFLAM ADARAVLIKL ADRLHNMKTL YALSPVKQQR FAKETLEIFA 360
  361 PLANCLGIST WKVQLENLCF KHLYPNQHNE MSTMLEDSFD EAMITSAIEK LDQALKKAGI 420
  421 SYHVLCGRHK SLYSIYSKML KKKLTVDEIH DIHGLRLIVD NEGDCYKALG VVHSLWSEVP 480
  481 GKLKDYITHP KFNGYQSLHT VVMDNGTVPL EVQIRTQEMH LQAEFGFAAH WRYKEGGCKY 540
  541 SSFVLQMVEW ARWVVTWHCE AMSKDRSSIS SSDSIKPPLQ VFRLTLEDCP ASYKPNSSQD 600
  601 GPVYVIVIEN DKMSVQEFPA SSTVSDLLSR AGPGSSRWSM YGIPAKEELR PRLNQIPVSD 660
  661 LKWKLKMGDV VELTPKIPDE SLTEYREEIQ RMYDRGLAFS RPGTMVGWGS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle