YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8118425
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLSSLAAA AVFLSLLAVG HCAAADFNAT DADADFAGNG WDFNSSDAAV YWGPWTKARA  60
   61 TWYGQPNGAG PDDNGGACGF KHTNQYPFMS MTSCGNQPLF KDGKGCGSCY KIRCTKDQSC 120
  121 SGRSETVIIT DMNYYPVAPF HFDLSGTAFG RLAKPGLNDK LRHSGIIDIE FTRVPCEFPG 180
  181 LKIGFHVEEY SNPVYFAVLV EYEDGDGDVV QVDLMESKTA HGPPTGKWTP MRESWGSIWR 240
  241 LDTNHRLQAP FSIRIRNESG KTLVANNVIP ANWRPNTFYR SFVQYS

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	286	0.99