YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10179427, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFQSLFFF VLVSLTAVAN AAIGPVADLT LTNAQVSPDG FAREAVVVNG ITPAPLITGN  60
   61 KGDRFQLNVI DQLTNHTMLK TSSIHWHGFF QQGTNWADGP AFVNQCPIAS GHSFLYDFQV 120
  121 PDQAGTFWYH SHLSTQYCDG LRGPFVVYDP NDPHASLYDI DNDDTVITLA DWYHVAAKLG 180
  181 PRFPFGSDST LINGLGRTTG IAPSDLAVIK VTQGKRYRFR LVSLSCDPNH TFSIDNHTMT 240
  241 IIEADSINTQ PLEVDSIQIF AAQRYSFVLD ASQPVDNYWI RANPAFGNTG FAGGINSAIL 300
  301 RYDGAPEIEP TSVQTTPTKP LNEVDLHPLS PMPVPGSPEP GGVDKPLNLV FNFNGTNFFI 360
  361 NDHTFVPPSV PVLLQILSGA QAAQDLVPEG SVFVLPSNSS IEISFPATAN APGFPHPFHL 420
  421 HGHAFAVVRS AGSSVYNYDN PIFRDVVSTG QPGDNVTIRF ETNNPGPWFL HCHIDFHLDA 480
  481 GFAVVMAEDT PDTKAANPVP QAWSDLCPIY DALDPSDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle