YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27597239
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVRRTSFLG CFILAVLGLI ISAPILCRGG TTSSFVRKVE KTIDMPMDSD VFSVPPGYNA  60
   61 PQQVHITQGD HVGKAMIVSW VTMDEPGSST VLYWSNNSKQ KNKATGAVTT YRFYNYTSGY 120
  121 IHHCIIKHLK FNTKYYYEVG IGHNPRTFWF VTPPQVGPDV PYTFGLIGDL GQSFDSNRTL 180
  181 THYELNPIKG QTVLFVGDLS YADNYPNHDN TRWDTWGRFV ERSVAYQPWI WTTGNHEIDF 240
  241 APEIGETKPF KPYTHRYRVP YKSSNSTAPF WYSIKRASAY IIVLSSYSAY GMYTPQYQWL 300
  301 YEELPKVNRS ETPWLIVLLH SPWYNSYNYH YMEGETMRVM YEPWFVQYKV DVVFAGHVHA 360
  361 YERSERVSNV AYNIVNGKCT PVRDQSAPIY ITIGDGGNIE GLANNMTEPQ PEYSAFREPS 420
  421 FGHATLDIKN RTHAYYSWHR NQEGYVVEAD KLRLYNRFWH PVDDSTTAKS

Type	Start	End	Confidence
Signal Peptide	1	27	0.92
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	470	0.99