YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|407353, gi\|74...
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLATLTVV QPTTTIKGLA GSSIAGTKLH VKSSRLNLKP SKSRAGAVVA KYGDKSVYFD  60
   61 LEDLGNTTGQ WDLYGSDAPS PYNSLQSKFF ETFAAPFTKR GLLLKFLILG GGSTLAYFSS 120
  121 TASGDILPIK KGPQLPPKLG PRGKI

Type	Start	End	Confidence
Cytoplasmic	1	101	0.55
Transmembrane Helix	102	119	0.55
Non-Cytoplasmic	120	145	0.89