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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSHC_ARATH
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAISYKPN PLISSSTQLL KRSKSFGLVR FPAKYGLGAT RKKQLFRVYA SESSSGSSSN  60
   61 SDGGFSWVRL AQSIRLGAER IGEKIGESVK TEIGFDSEEA SGRVNEYVAR VKDSVHKGHH 120
  121 ELTRFKNETV PSFIDWNKWE HWKDIRNWDG KRVAALFIYA FALLLSCQRV YVAIQAPRVE 180
  181 RERRELTESF MEALIPEPSP GNIEKFKRNM WRKATPKGLK LKRFIEAPDG TLVHDSSYVG 240
  241 ENAWDDDLET TEGSLKKIIG RNARIQTEAK KKLSQDLGVS GEIGDSVGNW RERLATWKEM 300
  301 LEREKLSEQL NSSAAKYVVE FDMKEVEKSL REDVIGRTSE TEGTRALWIS KRWWRYRPKL 360
  361 PYTYFLQKLD SSEVAAVVFT EDLKRLYVTM KEGFPLEYIV DIPLDPYLFE TICNAGVEVD 420
  421 LLQKRQIHYF MKVFIALLPG ILILWFIRES AMLLLITSKR FLYKKYNQLF DMAYAENFIL 480
  481 PVGDVSETKS MYKEVVLGGD VWDLLDELMI YMGNPMQYYE KDVAFVRGVL LSGPPGTGKT 540
  541 LFARTLAKES GLPFVFASGA EFTDSEKSGA AKINEMFSIA RRNAPAFVFV DEIDAIAGRH 600
  601 ARKDPRRRAT FEALIAQLDG EKEKTGIDRF SLRQAVIFIC ATNRPDELDL EFVRSGRIDR 660
  661 RLYIGLPDAK QRVQIFGVHS AGKNLAEDID FGKLVFRTVG FSGADIRNLV NEAAIMSVRK 720
  721 GRSYIYQQDI VDVLDKQLLE GMGVLLTEEE QQKCEQSVSY EKKRLLAVHE AGHIVLAHLF 780
  781 PRFDWHAFSQ LLPGGKETAV SVFYPREDMV DQGYTTFGYM KMQMVVAHGG RCAERVVFGD 840
  841 NVTDGGKDDL EKITKIAREM VISPQSARLG LTQLVKKIGM VDLPDNPDGE LIKYRWDHPH 900
  901 VMPAEMSVEV SELFTRELTR YIEETEELAM NALRANRHIL DLITRELLEK SRITGLEVEE 960
  961 KMKDLSPLMF EDFVKPFQIN PDDEELLPHK DRVSYQPVDL RAAPLHRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle