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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4322011
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSLPFADK LPRIRQREMP AIGAPVMVLA TLAMVVLPIP AFLLDMFFTF NIALAMVVLL  60
   61 VTVYTRRPLD FAAFPTVLLI ATLLRLALNV ASTRVVLLHG HEGGNAAGNV IEAFGNVVIG 120
  121 GNYAVGLVVF LILMIINFMV VTKGAGRISE VSARFTLDAL PGKQMAIDAD LNAGLIDQEQ 180
  181 ARVRRFEVTK EADFYGSMDG ASKFVKGDAI AGILILFINI IGGLSIGMAQ YGLGFGEAIQ 240
  241 IYTLLTIGDG LVAQIPSLLL SIAAAMMVTR QNTDEDMGEQ LVFQMFDNPK ALMITAAILG 300
  301 VMGIVPGMPH FAFLTLAVAA GTGAYLIDKR QKQKAKEPAL PAKAEDGSEP ISQRELSWDD 360
  361 VQPVDIIGLE VGYRLIPLVD RDQGGELLER VKGVRKKLSQ DFGFLIPAVH IRDNLELTPN 420
  421 SYRITLMGVA VGEAEIRPDQ ELAINPGQVY GMIDGEPTMD PAFGLEAVWI REEQREHAQA 480
  481 LGYTVVDSST VLATHLSQLL TNNASQLIGH EEVQNLLEML GRSAPKLVEN FVPDQLPLGV 540
  541 VVKVLQNLLN EAIPIRDIRT IVQTLAEYSS KSQEPDILTA AVRISLKRLI VQEINGIEPE 600
  601 LPVITLIPEL EQILHQTMQA SGGESAGIEP GLAERLQSSL SHATQEQELK GEPAVLLTSG 660
  661 VLRSTLAKFV KNTIPNLRVL SYQEIPDEKQ IRIVQAVGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle