YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7263182
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFPSGSRTIS VARNMPGTSY PTNNDNFSNG FPMATTQSER LLQAQNRRKF SFPATLHSAS  60
   61 LLEVGGGPKE TTRRRLSNVS DAVTRKLSYT IGWKAAQIPA QDIISQGRCL CGHYIKRRLR 120
  121 RSGLFNKKLG LQRIRSILGS TSMGIVRDVF PAVQVLGDEL ERMHPRIYNG VARQICRNPG 180
  181 GEFHTPDAVS LLLGAVGREL FRVEITWSKV ISLFAIAGGL SVDCVRQGHP EYLPKLMESV 240
  241 SEVIEDELVP WINENGGWSG INTHVLPTTN SLNPLEWTTL VIGVVFGLIL VFMILRFIFN 300
  301 LIVPKIYQRF TNS

Type	Start	End	Confidence
Non-Cytoplasmic	1	276	0.69
Transmembrane Helix	277	299	0.92
Cytoplasmic	300	313	0.89