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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4530126
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAISCILSL LLSSLIAQVS AQFNTEYCDN NKGNYTINST YHNNLNTLLS TLSSHTQINY  60
   61 GFYNFSHGQN NDKVNAIGLC RGDVKPDECR RCLNDSALTI TQLCPNQKEA LLWLNTSKCL 120
  121 LRYSHRTIFG VMESSPGFYL TNVNNVTEAD KFNQALSNLM RNPTVVAASG DSRLKYAADS 180
  181 AIAANFQTVY GLVQCTPDLS ETDCNRCLDG AISEIPSCCG NKMGGRVLRP SCNIRFESAI 240
  241 FYDSNAKLDP DVTPPSPPPS SFTNTSPKES NNTITIVIAV VVSIVVVAVV SLLGLCIYLR 300
  301 RKKARKSPTV NQDDDDDDIE ISQSLQFDFD TIRVATEDFS NSNKLGQGGF GAVYRGRLPN 360
  361 GQMIAVKRLS SGSSQGDTEF KNEVLLMAKL QHRNLVRLLG FCLEGRERLL IYEFVPNKSL 420
  421 DYFIFDPVKK AQLDWEMRYK IIRGIARGLL YLHEDSLLRI IHRDLKASNI LLDEEMNPKI 480
  481 ADFGMARLVL LDETHANTNR VVGTYGYMAP EYIMQGQFSV KSDIFSFGVL LLEIVSGQKN 540
  541 SGFRHGENVE DLLSFTWRNW RDGTAVNIVD PSLENNSRNE VMRCIHIGLL CVQENLTDRP 600
  601 TMATIMLMLS SYSLGLPIPS EPAFYANSTA RSLPATSSWG HSSRATANQS AQESENENSI 660
  661 TEPYPR

YRC Informatics Platform - Version 3.0
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