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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106364209, gi...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGVRNIYHH SYTSFLLVFV VMILFRPTLS IYFNTLSSTE SLTISNSRTL VSPGDVFELG  60
   61 FFKTTSSSRW YLGIWYKKLP GRTYVWVANR DNPLSNSIGT LKISNMNLVI LDHSNKSVWS 120
  121 TNHTRGNERS LVVAELLANG NFLMRDSNSN DAYGFLWQSF DYPTDTLLPE MKLGYDLKIG 180
  181 LNRSLTSWRS PDDPSSGYFS YKLEGSRRLP EFYLMQGDVR EHRSGPWNGI QFIGIPEDQK 240
  241 SSYMMYNFTD NSEEVAYTFV MTNNGIYSRL KLSSDGYLER LTWAPSSGAW NVFWSSPNHQ 300
  301 CDMYRMCGTY SYCDVNTSPS CNCIPGFNPK NRQQWDLRIP ISGCKRRTRL SCNGDGFTRM 360
  361 KNMKLPDTTM AIVDRSMGVK ECEKRCLSDC NCTAFANADI RNGGTGCVIW TGELEDMRNY 420
  421 AEGGQELYVR LAAADLVKKR NGNWKIISLI VGVSVVLLLL LLLLIMFCLW KRKQNRAKAM 480
  481 ATSIVNQQRN QNVLMNTMTQ SNKRQLSREN KADEFELPLI ELEAVVKATE NFSNCNELGR 540
  541 GGFGIVYKGM LDGQEVAVKR LSKTSLQGID EFMNEVRLIA RLQHINLVRI LGCCIEAGEK 600
  601 ILIYEYLENS SLDYFLFGKK RSSNLNWKDR FAITNGVARG LLYLHQDSRF RIIHRDLKPG 660
  661 NILLDKYMIP KISDFGMARI FARDETQVRT DNAVGTYGYM SPEYAMYGVI SEKTDVFSFG 720
  721 VIVLEIVIGK RNRGFYQVNP ENNLPSYAWT HWAEGRALEI VDPVILDSLS SLPSTFKPKE 780
  781 VLKCIQIGLL CIQERAEHRP TMSSVVWMLG SEATEIPQPK PPVYCLIASY YANNPSSSRQ 840
  841 FDDDESWTVN KYTCSVIDAR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle