YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16798638
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQALVAAMA AQTIIAASMA SPLTLSNGHY PFQSEFKGSV VRIPQRAFSF APAARALTVV  60
   61 AEAKKAVAVL KGNSQVEGVV NLSQEDNGPT TVKVRLTGLT PGKHGFHLHE FGDTTNGCMS 120
  121 TGSHFNPKKL THGAPEDDVR HAGDLGNIVA GSDGVAEATI VDNQIPLSGP DSVIGRALVV 180
  181 HELEDDLGKG GHELSLTTGN AGGRLACGVV GLTPI

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	215	0.99