YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16905460
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEHLSSLPT QMDYKGQKLA EQMFQGIYLF SAIVGFIYGY VAEQFGWTVY IVMAGFAFSC  60
   61 LLTLPPWPIY RRHPLKWLPV QESSTDDKKP GERKIKRHAK NN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.96
Transmembrane Helix	21	42	0.88
Non-Cytoplasmic	43	47	0.83
Transmembrane Helix	48	69	0.92
Cytoplasmic	70	102	0.98