YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16903088
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLAIVHAVFS LRARTLTYGV ITSLITWSVA VFASLPGLLF STCDTENNHT YCKTQHSGNS  60
   61 TTWKVLSSLE INVLGLVIPL GIMLFCYSMI IRTLRHCKNE KKNRAVRMIF AVVVLFLL

Type	Start	End	Confidence
Cytoplasmic	1	15	0.94
Transmembrane Helix	16	39	0.86
Non-Cytoplasmic	40	70	0.94
Transmembrane Helix	71	91	0.91
Cytoplasmic	92	118	0.87