YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ac3-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANLENGQK TIASTSKSHS QRQTTSRRRQ NDSDVAGGVG ITGGGVVILP QHVLNELYHN  60
   61 YSIKQRRSGL KWFVFAAALF NIWTIGIPWD QSAPTRVINC CMLLAYLALT ALLHIGRRSD 120
  121 KPALRRFHQI LLIIVPRALW LLSILHFTVY VILQPSFSPR DLLGWAILLN FLVYVTLPLQ 180
  181 LIFLGLSIGC ITYFICLSLP VGYSHWDSLL SNQLAANAVL IATAALIGLL YYFMGEAKQK 240
  241 RAFLEAKKSL EVKMVIEEQS AEQERLLLSV LPKHVAIKMR EDLGSSSSEA FKKIYMSRHE 300
  301 NVRNINNCAL RFLAIATTVL AVPLMSVQIT PSCVCTWDSP W

Type	Start	End	Confidence
Cytoplasmic	1	68	0.88
Transmembrane Helix	69	87	0.95
Non-Cytoplasmic	88	94	0.79
Transmembrane Helix	95	116	0.93
Cytoplasmic	117	129	0.89
Transmembrane Helix	130	150	0.89
Non-Cytoplasmic	151	161	0.66
Transmembrane Helix	162	177	0.93
Cytoplasmic	178	181	0.56
Transmembrane Helix	182	206	0.83
Non-Cytoplasmic	207	213	0.84
Transmembrane Helix	214	234	0.95
Cytoplasmic	235	307	0.97
Transmembrane Helix	308	330	0.77
Non-Cytoplasmic	331	341	0.80