YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0300650
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIDSAYNVD LRHMDEQQGS NVVAVGVDLS EFYMSVEWDI LEVPAVRNEK FYTCCDEPYL  60
   61 DITFNITMRR KTLFYTVNII IPCMGISFLT VLTFYLPSDS GEKVTLSISI LISLHVFFLL 120
  121 VVEIIPPTSL VVPLLGKYLI FAMILVSISI CVTVVVLNVH FRSPQTHKMA PWVKRVFIDF 180
  181 LPAFLFIKRP TYNFETSKLL LKDTHACFYP YYSATNIDRL VSSGYNNSLP KEDLSQSITA 240
  241 NGPFGGSCQV HGPVPPLTHC SSDEIAAVPD MDIGPLGMKS PILNNPAFSH SKCLPKIHKS 300
  301 CFCVRFIAEH TKMQEDSTKV KEDWKYVAMV LDRLFLWIFT LAVVVGTAGI ILQAPTLYDD 360
  361 RIPIIEQKDL DFSGTSAGRC RPPQ

Type	Start	End	Confidence
Cytoplasmic	1	73	0.66
Transmembrane Helix	74	96	0.92
Non-Cytoplasmic	97	103	0.60
Transmembrane Helix	104	126	0.79
Cytoplasmic	127	137	0.43
Transmembrane Helix	138	161	0.90
Non-Cytoplasmic	162	171	0.51
Transmembrane Helix	172	187	0.40
Cytoplasmic	188	333	0.84
Transmembrane Helix	334	354	0.89
Non-Cytoplasmic	355	384	0.86