YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16768186
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDSTFFALT SSFRAILGVA TNFVRLRSVF AQFWTTFAIF RGLNWMYRKI LYWLRLSNLD  60
   61 PSSAAFKKAF AEALNENNGQ ARGAPNVPRK GNSPWPVLAF ISFIFTAPYL IMKLLGTVTN 120
  121 TAQEEARNPA KWTAPIQTQA VYEFVARSPS ELSLRAGQML HVAPRDIQQT LNLLNTGWAL 180
  181 ATTNGQTSGI IPISYVKSPQ QMRQEMQDQT KPAQPQPELM NLSAGAFASP PLEQQMNYDF 240
  241 NLAAQQQAPL GPPSTTSAVL GEGFA

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.33
Transmembrane Helix	15	45	0.46
Cytoplasmic	46	93	0.44
Transmembrane Helix	94	112	0.70
Non-Cytoplasmic	113	265	0.57