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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7248489, gi|9...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVQATMST EIALDTLQAA NSIKRLTQLV NSSTNAWKAQ ESQMRSAGDY LGAAQAKYDG  60
   61 LGNSIQNQQQ KIEKLKQEQS QLKGNTVEVA EQYLKYQQQI DQATTRLAAL ENQQRQAKQS 120
  121 LDYQKSGLAD LQKAYKLQNE SSETYVKRLQ AEGKEDKARQ EQLKQYNNSI ANLSKQYEKQ 180
  181 KEMLERVAKQ TSKTSEEYLI QKKRLDETAI SMAHAKNAAD KLNNEIKQSQ QSSTLIGRLK 240
  241 NSFHRLGNEV DETEKKTSRL KGVFGATFAA NLISAGFQNA LGSIKSKFDE IAQSSADYVK 300
  301 YQQTMNATWL TLTGNAEDGK KMVDMTNQMA QAAANSTEMV DGMNQKFYAV THNTELTKQQ 360
  361 TQAILTLQDA FGQTDDAVKN FSTQWAQMIA NGKVQGQDMM SIINVFPEMK NQLKEVAAQE 420
  421 LGITDMTQDK YAELQKDGKI TSEMAQKALF ELQDKYKNAT ANFSTTIGGL ERTIQSRMPA 480
  481 IVAAFRDPID KMKNPFLQQI GNWVADPKTE TKFKDLGDHV SKGLSTIMDA FSKVFNLGSG 540
  541 TDKLNSFMDG LNKLVDNLSK SVANNAPKIV AFFKEAKDSL IALFSIGKSF VGGVWETAVA 600
  601 MIKGVAGAFS LMSENSKKTK GSVNSLSEAL GSISEHKTAI KTVGSLFAMY FVGSKVASGV 660
  661 MKVAKAINFM KKSTLAMTVA QKVATGVQWA LNAAMSANPL GLLVVGIAAV VAGFVMLYKH 720
  721 NKKFKKFVDG IAKSVKKVFG KVINFFKKDW KQVLLFIANP IAGAFALIYK HNKKFKKFVD 780
  781 GMVKHVKDMG KGFVKHMTNL GKDWGQKWDG IKGFASKTWE GIHKNSTNAM TVLGKDINNH 840
  841 HKDISKNWSD GWENSKAFLS KKWDEINKDA EQKFGGNVKT LVIDNLVNIG QKFKDTWEGI 900
  901 KNGFQDMWNN LKNLARDGIN AVIGIPNKGI DGINGLIHDF GGPKNAIGKI PEVPKFANGT 960
  961 GFFNGYRNPI TKTTLALLND GNDSPETGNQ EAVIMPNGDI HPVPGRNTYA VLPAGAEVLN1020
 1021 ASEWAALSGA KPFAKGTGFW SKIWDTTTSV AGSVWNGMKN GIDKFKKMIE FIGDVVKDPV1080
 1081 GTMAKKFSPN ADKLGAMFSP LGNALYKKPV QEAKNWWKEL WSMANASMNE GTAAMGAKGD1140
 1141 DYRFKDRAKD AGADPWGYYF RECVSFVASR LANLGVNSSL FSHLGDGRQW VNARVPHLSR1200
 1201 PKPGSVAVYT GGPISSNHVD FVTAVHGDTY DGEEYNYGGN GQYHQYAGRH VKNAATFLDF1260
 1261 GVRDSGSGDD GKPLKDRNNP LQTLIKRQVG GMFDWIKKTL GPLLSPAWGG EDGPQGTGVA1320
 1321 RWRDSVVKAL EANGIEATNF RVSKILATIK RESNGNPNAQ NNWDINALRG DPSIGLMQTI1380
 1381 GRTFNAYKHP GHNNIRNGYD NLLAAINYIK HRYGTSDAAF SRVAAYGYAN GGLVHKNGVY1440
 1441 ELAEGDMPEY VIPTDIAKRG RAWQLLTEAV ARFAGDAPQN NHDNSSSHQR VSILEDKLDV1500
 1501 MIGLLSQLVT NGSKPIEIQN IIDGRSISNG LAPFMTKATN EYERRQALLG GSII

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