YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24475545
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNISTINWV FVCGLSFCLG GIAVLSVMPL GSDCVCPLSN PLAKLAGGGE GVSVIKKEPA  60
   61 DEKQPQPHDH GASVHKMALL VPFRDRFEEL LQFVPHMTAF LKRQGVAHHI FVLNQVDRFR 120
  121 FNRASLINVG FQFASDVYDY IAMHDVDLLP LNDNLLYEYP SSLGPLHIAG PKLHPKYHYD 180
  181 NFVGGILLVR REHFKQMNGM SNQYWGWGLE DDEFFVRIRD AGLQVTRPQN IKTGTNDTFS 240
  241 HIHNRYHRKR DTQKCFNQKE MTRKRDHKTG LDNVKFKILK VHEMLIDQVP VTILNILLDC 300
  301 DVNKTPWCDC SGTAAAASAV QT

Type	Start	End	Confidence
Signal Peptide	1	26	0.54
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	322	0.97