YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPI_PSINU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIEKHLISL INDLCQISGV EVGQHFYWQL GGFQVHAQVL ITSWVVIVLL SGLAFVTTRD  60
   61 LRTIPTGGQN FVEYVLEFIR DLTRTQIGEE EYRPWVPFIG TLFLFIFVSN WSGALFPWKI 120
  121 IQLPHGELAA PTNDINTTVA LALLTSVAYF YAGLHKKGLS YFGRYIKPTP ILLPINILED 180
  181 FTKPLSLSFR LFGNILADEL VVAVLISLVP LVVPIPMMFL GLFTSAIQAL IFATLAAAYI 240
  241 GESMEGHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.74
Transmembrane Helix	35	57	0.90
Cytoplasmic	58	93	0.93
Transmembrane Helix	94	115	0.90
Non-Cytoplasmic	116	134	0.82
Transmembrane Helix	135	154	0.90
Cytoplasmic	155	190	0.88
Transmembrane Helix	191	213	0.82
Non-Cytoplasmic	214	218	0.63
Transmembrane Helix	219	241	0.88
Cytoplasmic	242	248	0.80