YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16648520
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVSGCLPT ATHSLQDMSA AAAAIALDMK PKLEPHPLAA ATAMPSQKIK KCAYTDLFPT  60
   61 FMQTYVHTYV YMYNFYAKCS RKSIRRTSSR IYFISSLPIQ IVRFTLCAMY IHIRTYVCMY 120
  121 IWVNKVRLIE VLRCLYRAFL KYSTVETRGL ILFAFIFVSQ QWFGATPPTS

Type	Start	End	Confidence
Cytoplasmic	1	90	0.50
Transmembrane Helix	91	113	0.55
Non-Cytoplasmic	114	144	0.49
Transmembrane Helix	145	165	0.64
Cytoplasmic	166	170	0.24