YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0300994
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHFDDVSLY GTPKEEPMPN IPIVSEKVSA NFLKSQLQSW FQPTDNRLAM KLFGSRKALV  60
   61 KERIRQKTSG HWVIHPCSSF RFYWDLCMLL LLVANLIILP VAISFFNDDL STRWIAFNCL 120
  121 SDTIFLIDIV VNFRTGIMQQ DNAEQVILDP KLIAKHYLRT WFFLDLISSI PLDYIFLIFN 180
  181 QIMKLQDFSD SFQILHAGRA LRILRLAKLL SLVRLLRLSR LVRYVSQWEE VYVSTSGSFW 240
  241 QRSVL

Type	Start	End	Confidence
Cytoplasmic	1	81	0.96
Transmembrane Helix	82	106	0.87
Non-Cytoplasmic	107	113	0.82
Transmembrane Helix	114	133	0.77
Cytoplasmic	134	160	0.73
Transmembrane Helix	161	179	0.77
Non-Cytoplasmic	180	245	0.62