YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16648106
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGCHMKIYN DEHKIADDVK IGDPLTIVIS IDKQKVYGLH VTDCIVRDGL GWGEQRLVGE  60
   61 DGCPMDNEIM GQFNYTQDRL AANVTFPAHK FPYTTSVYYQ CNVRLCALED PTCQEAPQCS 120
  121 GKRPKRQAAA DSKEEDGLPA TIEVFSGLYV NENENANDSG EDAVYKEKTL DDALCVSQRT 180
  181 FAIAIAIAGL ILMLAVVAAV LCIMARRSTK TVSNSGSSIY SGPYTNTAFS HSS

Type	Start	End	Confidence
Non-Cytoplasmic	1	181	0.86
Transmembrane Helix	182	204	0.93
Cytoplasmic	205	233	0.84