YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24899231
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLVLSFAL VALSALCASG DVPVQPDFKQ DKILGKWYGI GLASNSAWFQ AKKSLLKMCT  60
   61 TVITPTADGN LDVVATFPKQ DRCEKKSMTY RKTERPGHYL SKSPRYGSDH NIRVVETNYD 120
  121 EYILMHTTKT KGTEVNTIVS LFGRDKSLRP ELVEKFEQLA KEQGLSDANI LILPQTDSCM 180
  181 SEA

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	183	0.99