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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16611803
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSRKFEGK IPKLSQTSAA TGGATAAAEA STSKSSQGQQ QQIVYVNMLP AANTLNGIPQ  60
   61 QQQQQQYAST DGNVYQLQNE ILCDANGHAV TAATASYQTT ASSPQQQQQQ QQQQQDNVVT 120
  121 TISSSSILHT NANTNGVDTL AATQQQQQQQ QQQQQQQQHY HYITTTGEDG QTPTTIVFEN 180
  181 YNGGMPAVSS AAPTPVPVSQ ANAPATTTTT ALVNTDGTII EFDGSTYEEY HVLKSEPGSS 240
  241 DCLSNGSSAV AADIIKYDPQ HGVVGDEEDD DENGMLHVKY EEQSLEHDPE NEHDAEQEHE 300
  301 YEEYQVIKAE VEAEAAELAA GTTSYTISQE QTGSGNTVLS SMVPKSGSAA AAKQKRKRKT 360
  361 RVIADDEQGE YLEKMSVRGL DIARYEHIID GVAYCLVCAK NDIFKTFKNK YSFQRHAYLF 420
  421 HEGQNRKIFA CPICNKEFSR PDKMKMHKKD KHGDVPMPPS ATTTPLKADG PPAKRARTAR 480
  481 TPRVRKTKDG STPTKKRLAQ IDSVLDDVQN GESLTMAPVS VSHSQQQQQQ QIQHSITTLA 540
  541 PSTPSQPQHQ LQTLPSLDFS GMILPGGAQL ALANPGATSS VGLQRGPATP NGQPAPPTTT 600
  601 LIYSNQLELQ QALLQQQLQG QSIMIQDQAG NLVPLQLDGT QAIYTTAPQA QRQQTTATYQ 660
  661 TTQQQQQQPA QQPAGQAQQQ PHYELDNVTY LSSTAAATPT SAEQQQQQQQ QQHVIGTVQS 720
  721 YQILTPDGLQ NFQPKLETAE LGDLCPYSQY TFTTHAGAQP TLNANALDAQ TQHQQHHQQQ 780
  781 QHHHQQQQHH QQTQLLQQQP FATHHNPHQQ FMELKNELLI KGGDAYTLDT ASMYHLPFSP 840
  841 TSMINAVNDV NTSSLLETKE ISYDISEAVL LAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle