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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13346812
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALLQLVAL FHALDALSLS FLSNVEPTLP HLHPLSPPET NPAGARAKRQ AYQVYVDGDS  60
   61 SVSLDKTGQS ESGPWGPWVP EQCSRTCGGG VQTEKRQCPG DCTGPSVRYV SCNLEPCPEG 120
  121 TDFRAEQCAA HNDDPIDGQY HKWIPYKGKN KCELLCKPEN GNFYYKWDDT VVDGTKCDSK 180
  181 GDDICVDGVC LPLGCDGKLG SALKLDKCGV CDGDGSQCKT IEGSFDERNL SPGYHDVMRI 240
  241 PAGATAIRIE EARPSSNNLA MKNSSDYYFL NGNSMIQVEK DVELNGVHFE YDDGKPERIT 300
  301 AKGPLEEEVV VSVLIRKGNR DVSIKYEFSV PIVDEVDYMY KPGEWSACSV TCGKGQQTRT 360
  361 PYCIETKTQA RVDDQLCDDA NSTKPEFEKP CETVDCQAEW FKGEWEPCSQ TCGEQGEQYR 420
  421 VVYCHQVFAN GRRITVDDGN CTAERPAVRQ VCNRFACPEW QAGPWSACSE KCGDAFQYRS 480
  481 VTCRSEKEGE EGKLLPAEAC SSENTLESQR SCNLGPCTGL KFFTSEWKLC SKCNDTEETR 540
  541 EVTCKDSQGR AYPLEKCLTD DEKEIPVDTR ACATQQPCNY EWTASQWSKC STECGHGHKT 600
  601 RRVICAIHEE GDVTVVDEAL CQGEKPEVKM NCTNEEKCTG TWYSGPWSPC SVECGGGKQE 660
  661 RVAVCLNYDK KPVPEWCDES EMPNLIQDCN TDECPSCFDS EFGCCPDNTT FASGDFNQGC 720
  721 SNCSLSEFGC CADNYTEATG KGGRGCEEFV EQPLNLEEAS EGSGEEKTGE CQVTSENGDV 780
  781 AAVDCSAANA TTTDLEGLFG NGTDTNATMH CSKSEFGCCP DWFTPAEGPN NAGCPVFVLG 840
  841 ACNETEYGCC HDDVTLARGP NLEGCGEPTC AGSLYGCCKD RKTIAFGPHY AGCERSSFPC 900
  901 ELSEFGCCAD GETAALGANG TGCGENCLTT KYGCCPDGKG AAKGHHNEGC GCVYAQYGCC 960
  961 PDGKTSAKGA GFYGCPDSCA QSQFGCCPDG KTPARGSHKE GCPCQYTRYG CCPDGETTAL1020
 1021 GPRNDGCDDC RYAKYGCCPD GESKAIGPDY AGCPSTTLAP FLLGGTVAPS KISSCALPQD1080
 1081 QGTVCSSGYK LVWYYDTAEG RCSQFWYGGC DGNDNRFATK EQCETICVEP PGIGRCYLPK1140
 1141 VEGPLRCDQP QAKYWYDYNT KQCAAFWWRG CHGNANNFAS WEECSTFCKD VGPFAIPTTA1200
 1201 VPAPQPPQIP HMPQIESMEV EHQVVAHPIP DEAPLKDRRN DLRPRPPMPT IEEVCRSTQD1260
 1261 SGPCQDYSDQ FYYDAYKGTC QTFIYGGCGG NLNRFRTEEE CMQRCGFLNP TASSAYQAQQ1320
 1321 SPLHEGAQQE PHPIHQRGQG AGQAQSQQQE YEQPRQPPYP DQHQQGPVRP PPPVVPQQPS1380
 1381 YGIHAHSAKS RQSCHLPLDV GKCQGSFDSW YYEMATGSCV EFKYSGCSGN ANRFASREEC1440
 1441 ENTCVRHSEP HSDTTSHGTS VCDEAKETGP CTNFATKWYY NKADGTCNRF HYGGCEGTRN1500
 1501 RFDNEQSCKA ACANHQDACT LPKVQGPCSG KHEYYYFNTV SMSCEKFTYG GCLGNTNRFS1560
 1561 TLDECQSRCQ RK

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