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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12043535, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRMRSSRLL VLPLILVLIL TLLLQPIAVH AKSKKNKSSQ SSHHGDSSSS SSSSSSSSSS  60
   61 SGSSSAAASS ANDESKPKGG DNGGQHFAME PQDQTAVVGS RVTLPCRVME KVGALQWTKD 120
  121 DFGLGQHRNL SGFERYSMVG SDEEGDFSLD IYPLMLDDDA KYQCQVGPGP QGEQGIRSRF 180
  181 AKLTVLVPPE APKITQGDYL VTTEDREIEL ECVSQGGKPA AEITWIDGLG NVLTKGIEYV 240
  241 KEPLADSRRI TARSILKLAP KKEHHNTTFT CQAQNTADRT YRSAKLLLEV KYAPKVIVSV 300
  301 VGGALAGGKI PEGAEVILSC QADANPHELS YRWFINDELM TGDFTTKMII HNVSRQYHDA 360
  361 IVKCEVVNAV GKSEQSKKLD ISFGPVFRQR PVSVEADLGA TVSMRCDVAG NPEPEIEWIS 420
  421 ENSDQVVGVA AELKLKVSSE TAGRYFCKAV VNGFPEIGAE ATLYVKRAPI ITSHKVQFGG 480
  481 VGGRVKIDCL AFSIPKAEHI LWSFEGKIIN MSSADPDIYI FEEHHLPEGV RAALIIRDSK 540
  541 ATHFGKYNCT VLNSYGGDSL VITLLREPGN IPVLLVVMGS MFCVAIILMI VMIIIVYRKR 600
  601 RSRKKPMPAD VIPEASRGGD KLNELKSELR SKAYDVEYSE AGGDGLAINL TQSPMPDVQM 660
  661 KGATLGVPLA GPVKFDERFS GDFGGDRYNR QCHIKNLKNQ QETAYKGSPQ ANGYAHYFEY 720
  721 ALDYSPPGGE GAAVVVGSGG VGKLKNGGMN SATLPHSAAA TVNGGGAGNG GGASLPRNQR 780
  781 HEIQQSQQSN GFLGQPLLQN GIDSRFSAIY GNPYLRTNSS LLPPLPPPST ANPAATPAPP 840
  841 PYHAARHGHA HHANGGLKHF VGGAVITTSP VGNVNINGGG GGGSTPSGGG GVGVGVAAGG 900
  901 SVSGSSSNLT ASSNTLAATP LAGGGVGNSG QCAQSPSGQF ILSNNGKGHT QKGPLATHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle