YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RNKB_CERCA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKICGPKLSL CGLIISVWGI IQLVLMGLFF YINSVALIED LPIDEEFNSV EEFYTAATSA  60
   61 YNQNAYNCWI AACIYVLTLL LSAQQFYVNS RATAN

Type	Start	End	Confidence
Cytoplasmic	1	9	0.90
Transmembrane Helix	10	32	0.92
Non-Cytoplasmic	33	67	0.92
Transmembrane Helix	68	88	0.87
Cytoplasmic	89	95	0.91