YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16506611
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKRNNFYM RSLFLLALGI FGLLQYNNFN YLDSRDNVLG DAVTNDSDDA ILAMVPATLH  60
   61 KYLTPHSRNH SASGAGALNG AALLLNASSP GAATASTISF DVYHPPNITE IKRQIVRYND 120
  121 MQMVLNEDVF GPLQNDSVII VVQVHTRITY LRHLIVSLAQ ARDISKVLLV FSHDYYDDDI 180
  181 NDLVQQIDFC KVMQIFYPYS IQTHPNEYPG VDPNDCPRNI KKEQALITNC NNAMYPDLYG 240
  241 HYREAKFTQT KHHWIWKANR VFNELEVTRY HTGLVLFLEE DHYVAEDFLY LLAMMQQRTK 300
  301 DLCPQCNVLS LGTYLKTFNY YTYHSKVEVM PWVSSKHNMG FAFNRTTWSN IRKCARHFCT 360
  361 YDDYNWDWSL QHVSQQCLRR KLHAMIVKGP RVFHIGECGV HHKNKNCESN QVISKVQHVL 420
  421 RIARNSHQLF PRSLTLTVPS LMKKSKLRKG NGGWGDMRDH ELCLNMTLAT R

Type	Start	End	Confidence
Cytoplasmic	1	7	0.60
Transmembrane Helix	8	26	0.61
Non-Cytoplasmic	27	471	0.96