YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16226450, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKGKAVMGT GRRWAVEFSD QSTVPSSRDI LDPPGFSRAS QEQDDSANSR QKKDAEATWK  60
   61 LQKAWEVAQS PFKNLMMMGF MMWMAGNTVH LFSIGITFSA LWQPISALQS VGKIFEPFKD 120
  121 NKVELLMPKL VFLALNLGGL ALGVWKLNTL GLLPTHASDW VSSLPPPQEV EHSGGGFVFH 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	79	0.88
Transmembrane Helix	80	102	0.86
Non-Cytoplasmic	103	124	0.82
Transmembrane Helix	125	147	0.74
Cytoplasmic	148	180	0.72