YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227887395, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKAAKVDN GRSNMKAFFL TGSAALLLAC GVTVFPAMAG GKIVNLTLRV LVDGPPPCSV  60
   61 KGSAVEFGNV IIKSIDGANY RQAVGYTLNC SNSVSDDLQM QLQATTTTIN GETVLSTGIS 120
  121 GFGIRIQNAA DHSLVAVGNS SWLPFNINTQ PDFEAVPVKQ SGVELMASEF NATMTMVVDY 180
  181 Q

Type	Start	End	Confidence
Signal Peptide	1	39	0.94
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	181	0.99