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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47600678
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMKRHLNTC YRLVWNHITG AFVVASELAR ARGKRGGVAV ALSLAAVTSL PVLAADIVVH  60
   61 PCETVNGGTL VNHDNQFVSG TADGVTVSTG LELGPDSDEN TGGQWIKAGG TGRNTTVTAN 120
  121 GRQIVQAGGT ASDTVIRDGG GQSLNGLAVN TTLDNRGEQW VHGGGKAAGT IINQDGYQTI 180
  181 KHGGLATGTI VNTGAEGGPE SENVSSGQMV GGTAESTTIN KNGRQVIWSS GMARDTLIYA 240
  241 GGDQTVHGEA HNTRLEGGNQ YVHNGGTATE TLINRDGWQV IKEGGTAAHT TINQKGKLQV 300
  301 NAGGKASDVT QNTGGALVTS TAATVTGTNR LGAFSVVAGK ADNVVLENGG RLDVLSGHTA 360
  361 TNTRVDDGGT LDIRNGGAAT TVSMGNGGVL LADSGAAVSG TRSDGKAFSI GGGQADALML 420
  421 EKGSSFTLNA GDTATDTTVN GGLFTARGGT LAGTTTLNNG ATLTLSGKTV NNDTLTIREG 480
  481 DALLQGGALT GNGSVEKSGS GTLTVSNTTL TQKAVNLNEG TLTLNDSTVT TDVIAQRGTA 540
  541 LKLTGSTVLN GAIDPTNVTL TSGATWNIPD NATVQSVVDD LSHAGQIHFT SARTGKFVPT 600
  601 TLQVKNLNGQ NGTISLRVRP DMAQNNADRL VIDGGRATGK TILNLVNAGN SGTGLATTGK 660
  661 GIQVVEAING ATTEEGAFVQ GNMLQAGAFN YTLNRDSDES WYLRSENAYR AEVPLYASML 720
  721 TQAMDYDRIL AGSRSHQTGV NGENNSVRLS IQGGHLGHDN NGGIVRGATP ESSGSYGFVR 780
  781 LEGDLLRTEV AGMSLTTGVY GAAGHSSVDV KDDDGSRAGT VRDDAGSLGG YLNLVHTSSG 840
  841 LWADIVAQGT RHSMKASSDN NDFRARGRGW QGSLETGLPF SITDNLMLEP QLQYTWQGLS 900
  901 LDDGQDNAGY VKFGHGSAQH VRAGFRLGSH NDMTFGEGTS SRDTLRDSTK HGVSELPVNW 960
  961 WVQPSVIRTF SSRGDMSMGT AAAGSNMTFS PSRNGTSLDL QAGLEARVRE NITLGVQAGY1020
 1021 AHSVSGNSAE GYNGQATLNV TF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle