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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46485027, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQACKKSF SCGSQGFSGR SAVVSGSSRS SCVARSGAAS GGACGFRGGA GTFGSHSLYN  60
   61 LGGSKSISIS VAGGFSGGRS SCGSGFGSGY GGSFGSSRGM GGGFGGASGF GGAGGFGRPG 120
  121 GFGPGGCPGG IQEVTINQSL LQPLNVEIDP QIGQVKAQER EQIKILNNKF ASFIDKVRFL 180
  181 EQQNKVLETK WELLQQQTTR SGSGPLNLES FFESYISCLR KQLDSLLGAK GSLQGELKSM 240
  241 QDLVEDFKRK YEEEINRRTT AENEFVALKK DVDGAYMSKV ELQAKVDSLT DEINFLRTLY 300
  301 DMELSQMQSH ISDTSVVLSM DNNRCLDLDS IIAEVKAQYE DIAQRSKAEA EALYQTKLGE 360
  361 LQTTAGRHGD DLRSTKSEIM ELNRTIQRLR AEIENVKKQN TNLQASIAEA EQRGERALKD 420
  421 ADAKFQDLQA ALQKAKEDLA RLLREYQELM NVKLALDVEI ATYRKLLEGE ECRLSGEFQN 480
  481 AVSISVVSNV TSTSSSGGYR GAGGSNYGGD SSGRSSSSIG SRGSSGSRLG SGGSISVSQQ 540
  541 RTSFNSGGSQ TSVGSCYKSG RGGTSSVHFS QTTSSSQQRS K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle