YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46409142
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNAEPLTL SRDVKRSIEL LEKLQASGDF PTTKLAALQK VLNSDFMTSV REVYEHVYET  60
   61 VDIQGSHDVR ASATAKATVA AFAASEGHAH PRVVELPKTE EGKTRPYELR IEGIPLYHKT 120
  121 NTLIVKVYRP RIYVSIIHLI LKALSIFNFC FSGLGFNAMG GKEQNSPIYI SRIIPGGVAD 180
  181 RHGGLKRGDQ LLSVNGVSVE GENHEKAVEL LKQAVGSVKL VVRYTPKVLE EMEMRFDKQR 240
  241 NTRRRQ

Type	Start	End	Confidence
Cytoplasmic	1	138	0.56
Transmembrane Helix	139	156	0.58
Non-Cytoplasmic	157	246	0.93