YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6491892
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPPSHRQLC LAFLLVCVLS VISFLHIHQD SFPHGLGLSI LCRDRHLVTP PVAIFCLPGT  60
   61 AMGPNTSSSC PQHPASLSGT WTVYPNGRFG NQMGQYATLL ALAQLNGRQA FILPAMHAAL 120
  121 APVFRITLPV LAPEVDSHTP WRELQLHDWM SEEYADLRDP FLKLSGFPCS WTFFHHLREQ 180
  181 IRREFTLHDH LREEAQSVLG RLRLGRTGDR PRTFVGVHVR RGDYLQVMPQ RWKGVVGDSA 240
  241 YLRQAMDWFR ARHEAPVFVV TSNGMEWCKE NIDTSQGDVT FAGDGQEATP WKDFALLTQC 300
  301 NHTIMTIGTF GFWAAYLAGG DTVYLANFTL PDSEFLKIFK PEAAFLPEWV GINADLSPLW 360
  361 TLAKP

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	365	0.95