YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16226853
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHKLRLAA AVPVTFSSRL FLKPFTNTLT LGLFSRHLQP RNKPLLVRAF SASAAVQDIP  60
   61 ATQTSDSSAR PLWKAAIDFK WIRDNKEAVE INIRNRNSNA NLEAVLQLYE NMVNLQKEVE 120
  121 RLREERNNVA KKMKGKLEPS ERERLVEEGK NLKESLVTLE EDLVKLKDEL QHVAQSIPNM 180
  181 THPDVPVGGE DSSAIRQEVG SPREFSFPIK DHLQLGKDLD LIDFDSAAEV SGSKFFYLKN 240
  241 EAVLLEMALL NWTLSQVMKK GYTPLTTPEI VRSSIVEKCG FQPRGDNTQV YSIDGTDQCL 300
  301 IGTAEIPVGG IHMDSILLES ALPLKYIAFS HCFRTEAGAA GAATKGLYRV HQFSKAEMFV 360
  361 ICQPEDSESF HQELIQIEED LFTSLGLHFK TLDMATADLG APAYRKFDIE AWMPGLGRFG 420
  421 EISSASNCTD CQSRRLGIRY RPSEPPQTGP KKGKANLPAT KFVHTLNATA CAVPRMMVCL 480
  481 LENYQQEDGS VVIPEPLRPF MGGIELIKPK HK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle