YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18378947, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA  60
   61 GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH DISLKLPKEF DARTAWSQCT 120
  121 SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI 180
  181 AAWRYFKHHG VVTEECDPYF DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA 240
  241 YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD 300
  301 DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS 360
  361 SF

Type	Start	End	Confidence
Signal Peptide	1	32	0.69
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	362	0.99