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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DCSA_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRNEGGDFP INTPNNINSS GGSYNNSMNN SSNNIGRDIG NNQSSRNLKP KPSQSNLKWI  60
   61 ARDLKKKSVR KDSERKLKSS GVLKKKNTVM DFGEDDGGSG DDGNITEGLP ISEGMDDLPS 120
  121 SSNSRGGSGN DEQKKQFPKE MNSPSSEYGT TSGGQRFDTL VDPDISLAEM EEKMRQHKVY 180
  181 QEQQQQQQQQ QQQQKQKDKE LSSQKKKPSS MQLSKKKHVA KEDSETLETI IGEEKKEVVF 240
  241 EVKPYFSHAI LQATMAVFLI WNIFYFAYRA GWTMNRTDYI TFSYSILFII VEFISFLGSA 300
  301 LHLNNFTNPC TFVLVVTLEQ ILAKRRKKHP TVMMYVCTYK EPPSIVSRTF RTAISMDYPS 360
  361 ENLWIGLLDD SVNYRESRGW AHLQSVEKNF LYVLLQKAVY SVHNIRPPVT SQHEDPHGIL 420
  421 NETSSKIESS TKEVIEAEVQ WFIEYFLLNS WFGVGQEIPR DADDAERALI AKLRDDNFSP 480
  481 YRTFTKSESE KISNFTIDSL QSLWHGSAFF RPLIRSILLK KDYVRNFVSE LNNQHRLRFL 540
  541 NTEALAMAQY QVLMMGRQEL PWDEISSGNV RIDFDTCDGP IVSPKCTYLR RRKPPIPHNK 600
  601 AGNINNALFN ESTKADYEFL GLLDADQQPH PDFLKRVLPY FYSDEGQDLA FVQTPQFFSN 660
  661 IYPVDDPLGH RNMEFYGPVM EGRSANNACP FVGTNAIFRR QPLYDIGGIM YNSVTEDMYT 720
  721 GMKLQVSGYK SWYHNEVLVV GTAPVDLKET LEQRKRWAQG AVEIFSLTPW GYIRGKLGWR 780
  781 KMLYNLDSCI YPFLSPTAFF YGASPLIMSI WTVPIVVKDP IIFILVGMIP VMVLPRVIQY 840
  841 MILRAKRPYE AGKSGPSLWV EATDLWRAEQ TFFGFAGTYI SSWREGSASI VKLLKARKIS 900
  901 RHKLAMWNWK RDFVKKPVVC EVFRQTKLVN ENDNAQESSG KHKAEQSFRT SNKESDTIKN 960
  961 SRLFLPNIIL FVVNILAMMS AVLRFNCFQN DMWLLVVVAG FSFSTLWHLW SFIPMALRQS1020
 1021 EKQWPYASSY HAHNIVLFLV LGFLVLLFVD VKVCIPRVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle