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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FA8_CANLF
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVELYTCCF LCLLPFSLSA TRKYYLGAVE LSWDYMQSDL LSALHADTSF SSRVPGSLPL  60
   61 TTSVTYRKTV FVEFTDDLFN IAKPRPPWMG LLGPTIQAEV YDTVVIVLKN MASHPVSLHA 120
  121 VGVSYWKASE GAEYEDQTSQ KEKEDDNVIP GESHTYVWQV LKENGPMASD PPCLTYSYFS 180
  181 HVDLVKDLNS GLIGALLVCK EGSLAKERTQ TLQEFVLLFA VFDEGKSWHS ETNASLTQAE 240
  241 AQHELHTING YVNRSLPGLT VCHKRSVYWH VIGMGTTPEV HSIFLEGHTF LVRNHRQASL 300
  301 EISPITFLTA QTFLMDLGQF LLFCHIPSHQ HDGMEAYVKV DSCPEEPQLR MKNNEDKDYD 360
  361 DGLYDSDMDV VSFDDDSSSP FIQIRSVAKK HPKTWVHYIA AEEEDWDYAP SGPTPNDRSH 420
  421 KNLYLNNGPQ RIGKKYKKVR FVAYTDETFK TREAIQYESG ILGPLLYGEV GDTLLIIFKN 480
  481 QASRPYNIYP HGINYVTPLH TGRLPKGVKH LKDMPILPGE IFKYKWTVTV EDGPTKSDPR 540
  541 CLTRYYSSFI NLERDLASGL IGPLLICYKE SVDQRGNQMM SDKRNVILFS VFDENRSWYL 600
  601 TENMQRFLPN ADVVQPHDPE FQLSNIMHSI NGYVFDNLQL SVCLHEVAYW YILSVGAQTD 660
  661 FLSVFFSGYT FKHKMVYEDT LTLFPFSGET VFMSMENPGL WVLGCHNSDF RNRGMTALLK 720
  721 VSSCNRNIDD YYEDTYEDIP TPLLNENNVI KPRSFSQNSR HPSTKEKQLK ATTTPENDIE 780
  781 KIDLQSGERT QLIKAQSVSS SDLLMLLGQN PTPRGLFLSD LREATDRADD HSRGAIERNK 840
  841 GPPEVASLRP ELRHSEDREF TPEPELQLRL NENLGTNTTV ELKKLDLKIS SSSDSLMTSP 900
  901 TIPSDKLAAA TEKTGSLGPP NMSVHFNSHL GTIVFGNNSS HLIQSGVPLE LSEEDNDSKL 960
  961 LEAPLMNIQE SSLRENVLSM ESNRLFKEER IRGPASLIKD NALFKVNISS VKTNRAPVNL1020
 1021 TTNRKTRVAI PTLLIENSTS VWQDIMLERN TEFKEVTSLI HNETFMDRNT TALGLNHVSN1080
 1081 KTTLSKNVEM AHQKKEDPVP LRAENPDLSS SKIPFLPDWI KTHGKNSLSS EQRPSPKQLT1140
 1141 SLGSEKSVKD QNFLSEEKVV VGEDEFTKDT ELQEIFPNNK SIFFANLANV QENDTYNQEK1200
 1201 KSPEEIERKE KLTQENVALP QAHTMIGTKN FLKNLFLLST KQNVAGLEEQ PYTPILQDTR1260
 1261 SLNDSPHSEG IHMANFSKIR EEANLEGLGN QTNQMVERFP STTRMSSNAS QHVITQRGKR1320
 1321 SLKQPRLSQG EIKFERKVIA NDTSTQWSKN MNYLAQGTLT QIEYNEKEKR AITQSPLSDC1380
 1381 SMRNHVTIQM NDSALPVAKE SASPSVRHTD LTKIPSQHNS SHLPASACNY TFRERTSGVQ1440
 1441 EGSHFLQEAK RNNLSLAFVT LGITEGQGKF SSLGKSATNQ PMYKKLENTV LLQPGLSETS1500
 1501 DKVELLSQVH VDQEDSFPTK TSNDSPGHLD LMGKIFLQKT QGPVKMNKTN SPGKVPFLKW1560
 1561 ATESSEKIPS KLLGVLAWDN HYDTQIPSEE WKSQKKSQTN TAFKRKDTIL PLGPCENNDS1620
 1621 TAAINEGQDK PQREAMWAKQ GEPGRLCSQN PPVSKHHQRE ITVTTLQPEE DKFEYDDTFS1680
 1681 IEMKREDFDI YGDYENQGLR SFQKKTRHYF IAAVERLWDY GMSRSPHILR NRAQSGDVQQ1740
 1741 FKKVVFQEFT DGSFTQPLYR GELNEHLGLL GPYIRAEVED NIVVTFKNQA SRPYSFYSSL1800
 1801 ISYDEDEGQG AEPRRKFVNP NETKIYFWKV QHHMAPTKDE FDCKAWAYFS DVDLEKDVHS1860
 1861 GLIGPLLICR SNTLNPAHGR QVTVQEFALV FTIFDETKSW YFTENLERNC RAPCNVQKED1920
 1921 PTLKENFRFH AINGYVKDTL PGLVMAQDQK VRWYLLSMGS NENIHSIHFS GHVFTVRKKE1980
 1981 EYKMAVYNLY PGVFETVEML PSQVGIWRIE CLIGEHLQAG MSTLFLVYSK KCQTPLGMAS2040
 2041 GHIRDFQITA SGQYGQWAPK LARLHYSGSI NAWSTKDPFS WIKVDLLAPM IIHGIMTQGA2100
 2101 RQKFSSLYVS QFIIMYSLDG NKWHSYRGNS TGTLMVFFGN VDSSGIKHNI FNPPIIAQYI2160
 2161 RLHPTHYSIR STLRMELLGC DFNSCSMPLG MESKAISDAQ ITASSYLSSM LATWSPSQAR2220
 2221 LHLQGRTNAW RPQANNPKEW LQVDFRKTMK VTGITTQGVK SLLISMYVKE FLISSSQDGH2280
 2281 NWTLFLQNGK VKVFQGNRDS STPVRNRLEP PLVARYVRLH PQSWAHHIAL RLEVLGCDTQ2340
 2341 QPA

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