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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6552726
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDINSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPAM  60
   61 ADATYIEPIE WQTVAKIIEK ERPDVILPTM GGQTALNCAL ALAKNGVLEK YNVELIGAKE 120
  121 EAINMAEDRN LFDQAMKRIG LSCARAKIVH TLEEAKEAPK EFGFPCIIRP SFTMGGSGGG 180
  181 IAYNWDEFEE ICTRGLDLSP TNELLIDESL LGWKEYEMEV VRDKNDNCII VCSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQIMRNASIA VLREIGVETG GSNVQFAVNP VDGRMVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELKNDIT GGATPASFEP SIDYVVTKVP 360
  361 RFTFEKFGDA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGSAGFE SKVDYTTEEG 420
  421 AAKVRRELTT AGAERIWYVG DAFRMGLSVN DAFNLSKIDP WFLVQVKELI DIEQSLRGKS 480
  481 LNDLDADKLF QLKRKGFSDK RLALLLGSTE KAVRHHRQGL NIRPTYKRVD TCAAEFSTST 540
  541 AYMYSTYEEE CEANPSDKKK ILVIGGGPNR IGQGIEFDYC CVHAALAMRE DGYETIMVNC 600
  601 NPETVSTDYD TSDRLFFEPV TLEDVLEIVH KEKPVGVIVQ FGGQTPLKLA RALEAEGVPI 660
  661 IGTSPDAIDK AEDRERFQQM INKLGLLQPP NAIVRSLEEA LLAADKVGYP LVVRPSYVLG 720
  721 GRAMEIVYKE DELRTYMRTA VQVSEDAPVL LDHFLNNAIE VDIDSVSDGK QVVIGGIMQH 780
  781 IEQCGVHSGD SACSLPPYSL PADVQDDMRE IVKKMAIELG VIGLMNTQLA YQDGKIYVIE 840
  841 VNPRASRTVP FVSKCIGVSL AKVAARCQAG VSLEEQGFTK EIIPDYFSVK EAVFPFNKFP 900
  901 AVDPILGPEM KSTGEVMGVG NTFGEAYGKS QLGANNRIPT SGTAFISVRD MDKDGIVSVG 960
  961 KDLAELGFKL VATRGTAEVL QQAGLTVQIV NKVQEGRPHI VDMIKNDEID LIINTVEGRQ1020
 1021 ATRDSSSIRR SAENHRVYYN TTLAAGFAVC MSLKEVKDIE VRRLQDLHTR IK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle