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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7105717
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSKGISLE EIRNETVDLE KIPIEEVFEQ LKCTKEGLSS EEGANRLQIF GPNKLEEKKE  60
   61 SKILKFLGFM WNPLSWVMEA AAIMAIALAN GEGKPPDWQD FVGIVCLLVI NSTISFIEEN 120
  121 NAGNAAAALM AGLAPKTKVL RDGKWSEQEA AILVPGDIIS VKLGDIIPAD ARLLEGDPLK 180
  181 VDQSALTGES LPVTKHPGQE VFSGSTCKQG EIEAVVIATG VHTFFGKAAH LVDSTNQVGH 240
  241 FQKVLTAIGN FCICSIAVGM LVEIIVMYPI QHRKYRDGID NLLVLLIGGI PIAMPTVLSV 300
  301 TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKNL IEVFVKDGDK 360
  361 DHVLLLAARA SRVENQDAID AAIVGTLADP REARASITEV HFLPFNPVDK RTAITYIDSN 420
  421 GNWHRASKGA PEQILALCNA KEDFKKKVHS IIDKFAERGL RSLAVSRQQV PEKSKESAGA 480
  481 PWQFVGLLSL FDPPRHDSAE TIRQTLHLGV NVKMITGDQL AIAKETGRRL GMGTNMYPSA 540
  541 SLLGQDKDAN IAALPVEELI EKADGFAGVF PEHKYEIVKK LQERKHICGM TGDGVNDAPA 600
  601 LKKADIGIAV ADATDAARSA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSITIR 660
  661 IVFGFLFIAL IWKFDFSPFM VLIIAILNDG TIMTISKDRV KPSPLPDSWK LKEIFATGIV 720
  721 LGGYLALMTV IFFWAMHDTD FFSEKFSVRS LRGSENEMMG ALYLQVSIVS QALIFVTRSR 780
  781 SWSYAERPGL LLLSAFIIAQ LVATLIAVYA NWGFARIKGI GWGWAGVIWL YSIVFYVPLD 840
  841 FIKFAIRYIL SGKAWLTLFE NKTAFTTKKD YGKEEREAQW ALAQRTLHGL QPPETSNLFH 900
  901 EKNSYRELSE IAEQAKRRAE VARLRELHTL KGHVESVVKL KGLDIDTIQQ HYTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle