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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1895062
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMAEIGGHL AHQLPLHNHN HNQTGLQPSL VMNHHLDLDC HGHDVIKKQR LSHCVGCGGQ  60
   61 IHDQYILRVA PDLEWHAACL KCQECRQFLD ESCTCFVRDG KTYCKRDYVR LFGTKCDKCG 120
  121 NSFSKNDFVM RAKTKIFHIE CFRCSACARQ LLPGDEFALR DAGALYCKED HDVLEKSSQS 180
  181 SLTSSSVESN NNISSSNNNN TNLSNNNHSS ELGSMSDSGS ESGSHKSIRD KRPSGPSDGK 240
  241 PTRVRTVLNE KQLHTLRTCY NANPRPDALM KEQLVEMTSL SPRVIRVWFQ NKRCKDKKKT 300
  301 IQMKLQMHEE KEGRKLGYGA MQGIPMIASS PVRHDSPLNL QGLDVQTYQP PWKALSDFAL 360
  361 HADLDSNGAI NTHTPAFQQL VNQMHGYDLN GMPILPPHPH SHPAQGPPHQ HPPPPGGPHN 420
  421 HQNQQPNQQP GGSSLDSGIT SHHHPDSTDS YVTYLESDDK SKLALTPSSS SSASAGTSIS 480
  481 SPPSGVGAGG GGAVGGGSGV LGLGVVANQS ATEQLMQMLQ KVTGSASPAS HAVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle